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Table 4. Number of genes associated with the general COG functional categories

From: Complete genome sequence of Brachyspira murdochii type strain (56-150T)

Code

value

%age

Description

J

134

6.6

Translation, ribosomal structure and biogenesis

A

1

0.0

RNA processing and modification

K

81

4.0

Transcription

L

104

5.2

Replication, recombination and repair

B

0

0.0

Chromatin structure and dynamics

D

20

1.0

Cell cycle control, cell division, chromosome partitioning

Y

0

0.0

Nuclear structure

V

44

2.2

Defense mechanisms

T

116

5.8

Signal transduction mechanisms

M

143

7.1

Cell wall/membrane/envelope biogenesis

N

100

5.0

Cell motility

Z

0

0.0

Cytoskeleton

W

0

0.0

Extracellular structures

U

51

2.5

Intracellular trafficking secretion, and vesicular transport

O

62

3.1

Posttranslational modification, protein turnover, chaperones

C

111

5.5

Energy production and conversion

G

143

7.1

Carbohydrate transport and metabolism

E

185

9.2

Amino acid transport and metabolism

F

56

2.8

Nucleotide transport and metabolism

H

67

3.3

Coenzyme transport and metabolism

I

53

2.6

Lipid transport and metabolism

P

99

4.9

Inorganic ion transport and metabolism

Q

20

1.0

Secondary metabolites biosynthesis, transport and catabolism

R

286

14.2

General function prediction only

S

143

7.1

Function unknown

-

1,078

37.3

Not in COGs