Table 3. Genome Statistics
From: Complete genome sequence of Spirosoma linguale type strain (1T)
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 8,491,258 | 100.00% |
DNA coding region (bp) | 7,518,086 | 88.54% |
DNA G+C content (bp) | 4,258,276 | 50.15% |
Number of replicons | 9 | |
Extrachromosomal elements | 8 | |
Total genes | 7,129 | 100.00% |
RNA genes | 60 | 0.84% |
rRNA operons | 4 | |
Protein-coding genes | 7,069 | 99.16% |
Pseudo genes | 131 | 1.84% |
Genes with function prediction | 4,386 | 61.52% |
Genes in paralog clusters | 1,713 | 2.71% |
Genes assigned to COGs | 4,306 | 60.40% |
Genes assigned Pfam domains | 4,519 | 63.39% |
Genes with signal peptides | 2,271 | 41.86% |
Genes with transmembrane helices | 1,606 | 22.53% |
CRISPR repeats | 2 |