Table 2. Genome sequencing project information
From: Complete genome sequence of Spirosoma linguale type strain (1T)
MIGS ID | Property | Term |
|---|---|---|
MIGS-31 | Finishing quality | Finished |
MIGS-28 | Libraries used | Two Sanger libraries: 8kb pMCL200 and fosmid pcc1Fos |
One 454 pyrosequence and one Solexa standard library | ||
MIGS-29 | Sequencing platforms | ABI3730, 454 GS FLX, Illumina GA |
MIGS-31.2 | Sequencing coverage | 10.1× Sanger; 18.4× pyrosequence |
MIGS-30 | Assemblers | Newbler 1.1.02.15, phrap |
MIGS-32 | Gene calling method | Prodigal, GenePRIMP |
INSDC ID | CP001769 (chromosome) | |
CP001770-77 (plasmids) | ||
Genbank Date of Release | January 13, 2010 | |
GOLD ID | Gc01186 | |
NCBI project ID | 28817 | |
Database: IMG-GEBA | 2501939635 | |
MIGS-13 | Source material identifier | DSM 74 |
Project relevance | Tree of Life, GEBA |