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Table 5. Percent-wise 16S rRNA sequence divergence 1

From: Complete genome sequence of Geodermatophilus obscurus type strain (G-20T)

 

16S rRNA

GGD formula 1

GGD formula 2

GGD formula 3

Number of shared homologs

%age

A. cellulolyticus 11BT (NC_008578)

6.45%

0.930

0.231

0.946

2,309

44.7%

F. alni ACN14A (NC_008278)

5.81%

0.915

0.212

0.933

3,124

60.5%

N. multipartita Y-104T (NC_013235)

6.76%

0.886

0.212

0.910

3,300

63.9%

  1. 1Percent-wise 16S rRNA sequence divergence compared to genomic similarity for the three closest available genomes to G. obscurus strain G-20T. GGD formulas: formula 1, length of sequence fragments not in HSPs per average total genome length; formula 2, number of non-identical bases per total HSP length; formula 3, number of non-identical bases within HSPs per average total genome length.