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Table 4. Number of genes associated with the general COG functional categories

From: Complete genome sequence of Haliangium ochraceum type strain (SMP-2T)

Code Value %age Description
J 182 2.6 Translation, ribosomal structure and biogenesis
A 2 0.0 RNA processing and modification
K 488 7.1 Transcription
L 439 6.4 Replication, recombination and repair
B 3 0.0 Chromatin structure and dynamics
D 54 0.8 Cell cycle control, mitosis and meiosis
Y 0 0.0 Nuclear structure
V 83 1.2 Defense mechanisms
T 549 8.0 Signal transduction mechanisms
M 250 3.6 Cell wall/membrane biogenesis
N 55 0.8 Cell motility
Z 16 0.2 Cytoskeleton
W 0 0.0 Extracellular structures
U 89 1.3 Intracellular trafficking and secretion
O 194 2.8 Posttranslational modification, protein turnover, chaperones
C 265 3.8 Energy production and conversion
G 186 2.7 Carbohydrate transport and metabolism
E 308 4.5 Amino acid transport and metabolism
F 78 1.1 Nucleotide transport and metabolism
H 183 2.7 Coenzyme transport and metabolism
I 204 3.0 Lipid transport and metabolism
P 163 2.4 Inorganic ion transport and metabolism
Q 174 2.5 Secondary metabolites biosynthesis, transport and catabolism
R 754 10.9 General function prediction only
S 332 4.8 Function unknown
- 2915 42.3 Not in COGs