Table 3. Genome Statistics
From: Complete genome sequence of Haliangium ochraceum type strain (SMP-2T)
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 9,446,314 | 100.00% |
DNA coding region (bp) | 8,424,350 | 89.18% |
DNA G+C content (bp) | 6,563,619 | 69.48% |
Number of replicons | 1 | |
Extrachromosomal elements | 0 | |
Total genes | 6,951 | 100.00% |
RNA genes | 53 | 0.76% |
rRNA operons | 2 | |
Protein-coding genes | 6,898 | 99.24% |
Pseudo genes | 53 | 0.76% |
Genes with function prediction | 4,318 | 62.12% |
Genes in paralog clusters | 1,329 | 19.12% |
Genes assigned to COGs | 4,036 | 58.06% |
Genes assigned Pfam domains | 4,167 | 59.95% |
Genes with signal peptides | 1,786 | 25.69% |
Genes with transmembrane helices | 1,371 | 19.72% |
CRISPR repeats | 3 |