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Table 1. Classification and general features of H. ochraceum SMP-2T according to the MIGS recommendations [16]

From: Complete genome sequence of Haliangium ochraceum type strain (SMP-2T)

MIGS ID

Property

Term

Evidence code

 

Current classification

Domain Bacteria

TAS [17]

 

Phylum Proteobacteria

TAS [18]

 

Class Deltaproteobacteria

TAS [19]

 

Order Myxococcales

TAS [20,21]

 

Suborder Nannocystineae

TAS [6,22]

 

Family ‘Haliangiaceae’/Kofleriaceae

TAS [6,8]

 

Genus Haliangium

TAS [1]

 

Species Haliangium ocharaceum

TAS [1]

 

Type strain SMP-2

TAS [1]

 

Gram stain

negative

TAS [1]

 

Cell shape

rods

TAS [1]

 

Motility

gliding

TAS [1]

 

Sporulation

myxospores

TAS [1]

 

Temperature range

mesophile, 20–40°C

TAS [1]

 

Optimum temperature

30–34°C

TAS [1]

 

Salinity

halophile, optimum 2% NaCl

TAS [1]

  

tolerates up to 6% NaCl

TAS [2,23]

MIGS-22

Oxygen requirement

strictly aerobic

TAS [1]

 

Carbon source

macromolecules such as proteins

TAS [1]

 

Energy source

chemoorganotrophic

TAS [1]

MIGS-6

Habitat

marine

TAS [1,23]

MIGS-15

Biotic relationship

isolated from seaweed

TAS [2]

MIGS-14

Pathogenicity

non pathogenic

NAS

 

Biosafety level

1

TAS [24]

 

Isolation

dry sample of seaweed (Laminariales)

TAS [1]

MIGS-4

Geographic location

Miura Peninsula, Japan

TAS [2]

MIGS-5

Sample collection time

1997

TAS [2]

MIGS-4.1

Latitude

35.259, 139.629

NAS

MIGS-4.2

Longitude

MIGS-4.3

Depth

not reported

 

MIGS-4.4

Altitude

sea-level

 
  1. Evidence codes - IDA: Inferred from Direct Assay (first time in publication); TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from of the Gene Ontology project [25]. If the evidence code is IDA, then the property was directly observed for a live isolate by one of the authors or an expert mentioned in the acknowledgements.