Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Sulfurospirillum deleyianum type strain (5175T)
Code | value | %age | Description |
|---|---|---|---|
J | 141 | 6.2 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 88 | 3.8 | Transcription |
L | 113 | 4.9 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 25 | 1.1 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.0 | Nuclear structure |
V | 27 | 1.1 | Defense mechanisms |
T | 181 | 7.9 | Signal transduction mechanisms |
M | 128 | 5.6 | Cell wall/membrane biogenesis |
N | 83 | 3.6 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 61 | 2.7 | Intracellular trafficking and secretion |
O | 85 | 3.7 | Posttranslational modification, protein turnover, chaperones |
C | 150 | 6.5 | Energy production and conversion |
G | 53 | 2.3 | Carbohydrate transport and metabolism |
E | 154 | 6.7 | Amino acid transport and metabolism |
F | 51 | 2.2 | Nucleotide transport and metabolism |
H | 101 | 4.4 | Coenzyme transport and metabolism |
I | 43 | 1.9 | Lipid transport and metabolism |
P | 112 | 4.9 | Inorganic ion transport and metabolism |
Q | 21 | 0.9 | Secondary metabolites biosynthesis, transport and catabolism |
R | 194 | 8.5 | General function prediction only |
S | 119 | 5.2 | Function unknown |
- | 619 | 27.0 | Not in COGs |