Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Gordonia bronchialis type strain (3410T)
Code | value | %age | Description |
|---|---|---|---|
J | 164 | 3.3 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.0 | RNA processing and modification |
K | 357 | 7.2 | Transcription |
L | 238 | 4.8 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 28 | 0.6 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.0 | Nuclear structure |
V | 50 | 1.0 | Defense mechanisms |
T | 158 | 3.2 | Signal transduction mechanisms |
M | 133 | 2.7 | Cell wall/membrane biogenesis |
N | 2 | 0.0 | Cell motility |
Z | 1 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 30 | 0.6 | Intracellular trafficking and secretion |
O | 123 | 2.5 | Posttranslational modification, protein turnover, chaperones |
C | 261 | 5.3 | Energy production and conversion |
G | 197 | 4.0 | Carbohydrate transport and metabolism |
E | 283 | 5.7 | Amino acid transport and metabolism |
F | 90 | 1.8 | Nucleotide transport and metabolism |
H | 172 | 3.5 | Coenzyme transport and metabolism |
I | 270 | 5.5 | Lipid transport and metabolism |
P | 202 | 4.1 | Inorganic ion transport and metabolism |
Q | 210 | 4.2 | Secondary metabolites biosynthesis, transport and catabolism |
R | 505 | 10.2 | General function prediction only |
S | 286 | 5.8 | Function unknown |
- | 1664 | 33.7 | Not in COGs |