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Table 4. Number of genes associated with the general COG functional categories

From: Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IAT)

Code

value

%age

Description

J

147

4.7

Translation, ribosomal structure and biogenesis

A

0

0.0

RNA processing and modification

K

191

6.1

Transcription

L

177

5.6

Replication, recombination and repair

B

0

0.0

Chromatin structure and dynamics

D

33

1.0

Cell cycle control, mitosis and meiosis

Y

0

0.0

Nuclear structure

V

29

0.9

Defense mechanisms

T

110

3.5

Signal transduction mechanisms

M

124

3.9

Cell wall/membrane biogenesis

N

58

1.8

Cell motility

Z

0

0.0

Cytoskeleton

W

0

0.0

Extracellular structures

U

59

1.9

Intracellular trafficking and secretion

O

78

2.5

Posttranslational modification, protein turnover, chaperones

C

130

4.1

Energy production and conversion

G

203

6.4

Carbohydrate transport and metabolism

E

201

6.4

Amino acid transport and metabolism

F

61

1.9

Nucleotide transport and metabolism

H

117

3.7

Coenzyme transport and metabolism

I

120

3.8

Lipid transport and metabolism

P

104

3.3

Inorganic ion transport and metabolism

Q

58

1.8

Secondary metabolites biosynthesis, transport and catabolism

R

266

8.4

General function prediction only

S

185

5.9

Function unknown

-

1014

32.2

Not in COGs