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Table 4. Number of protein-coding genes associated with the 25 general COG functional categories in S. stibiiresistens SB22T genome.

From: Genomic analysis of Skermanella stibiiresistens type strain SB22T

Code

Value

%agea

COG Category

J

188

2.59

Translation, ribosomal structure and biogenesis

A

1

0.01

RNA processing and modification

K

478

6.58

Transcription

L

240

3.30

Replication, recombination and repair

B

6

0.08

Chromatin structure and dynamics

D

50

0.69

Cell cycle control, cell division, chromosome partitioning

Y

0

0.00

Nuclear structure

V

73

1.00

Defense mechanisms

T

651

8.96

Signal transduction mechanisms

M

389

5.35

Cell wall/membrane/envelope biogenesis

N

147

2.02

Cell motility

Z

0

0.00

Cytoskeleton

W

0

0.00

Extracellular structures

U

76

1.05

Intracellular trafficking, secretion, and vesicular transport

O

195

2.68

Posttranslational modification, protein turnover, chaperones

C

405

5.57

Energy production and conversion

G

508

6.99

Carbohydrate transport and metabolism

E

678

9.33

Amino acid transport and metabolism

F

101

1.39

Nucleotide transport and metabolism

H

230

3.16

Coenzyme transport and metabolism

I

267

3.67

Lipid transport and metabolism

P

383

5.27

Inorganic ion transport and metabolism

Q

226

3.11

Secondary metabolites biosynthesis, transport and catabolism

R

787

10.83

General function prediction only

S

573

7.88

Function unknown

-

617

8.49

Not in COGS

  1. a The total is based on the total number of protein coding genes in the annotated genome.