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Table 4. Number of genes associated with the general COG functional categories

From: Genome sequence of the pink to light reddish-pigmented Rubellimicrobium mesophilum type strain (DSM 19309T), a representative of the Roseobacter group isolated from soil, and emended description of the species

Code Value %age Description
J 186 4.4 Translation, ribosomal structure and biogenesis
A 3 0.1 RNA processing and modification
K 279 6.6 Transcription
L 250 5.9 Replication, recombination and repair
B 4 0.1 Chromatin structure and dynamics
D 35 0.8 Cell cycle control, cell division, chromosome partitioning
Y 0 0.0 Nuclear structure
V 34 0.8 Defense mechanisms
T 176 4.2 Signal transduction mechanisms
M 223 5.3 Cell wall/membrane/envelope biogenesis
N 27* 0.6 Cell motility
Z 0 0.0 Cytoskeleton
W 0 0.0 Extracellular structures
U 51 1.2 Intracellular trafficking and secretion, and vesicular transport
O 148 3.5 Posttranslational modification, protein turnover, chaperones
C 251 6.0 Energy production and conversion
G 453 10.7 Carbohydrate transport and metabolism
E 478 11.3 Amino acid transport and metabolism
F 94 2.2 Nucleotide transport and metabolism
H 152 3.6 Coenzyme transport and metabolism
I 143 3.4 Lipid transport and metabolism
P 182 4.3 Inorganic ion transport and metabolism
Q 124 2.9 Secondary metabolites biosynthesis, transport and catabolism
R 508 12.0 General function prediction only
S 421 10.0 Function unknown
- 1,320 25.7 Not in COGs
  1. *Only one gene each for flagellar motor and flagellar hook capping, no structural genes for flagella.