Table 3. Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 4,927,676 | 100.00 |
DNA coding region (bp) | 4,254,404 | 86.34 |
DNA G+C content (bp) | 3,431,981 | 69.65 |
Number of scaffolds MIGS-9 | 127 | |
Extrachromosomal elements MIGS-10 | 1 | |
Total genes | 5,138 | 100.00 |
RNA genes | 56 | 1.09 |
rRNA operons | 1 | |
tRNA genes | 45 | 0.88 |
Protein-coding genes | 2,915 | 56.73 |
Genes with function prediction (proteins) | 2,167 | 42.18 |
Genes in paralog clusters | 4,172 | 81.20 |
Genes assigned to COGs | 3,818 | 74.31 |
Genes assigned Pfam domains | 3,977 | 77.40 |
Genes with signal peptides | 384 | 7.47 |
Genes with transmembrane helices | 966 | 18.80 |
CRISPR repeats | 0 |