Table 4. Number of genes associated with the general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 170 | 4.9 | Translation, ribosomal structure and biogenesis |
A | 3 | 0.1 | RNA processing and modification |
K | 203 | 5.8 | Transcription |
L | 153 | 4.4 | Replication, recombination and repair |
B | 3 | 0.1 | Chromatin structure and dynamics |
D | 27 | 0.8 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 40 | 1.1 | Defense mechanisms |
T | 139 | 4.0 | Signal transduction mechanisms |
M | 201 | 5.7 | Cell wall/membrane/envelope biogenesis |
N | 24 | 0.7 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 54 | 1.5 | Intracellular trafficking and secretion, and vesicular transport |
O | 123 | 3.5 | Posttranslational modification, protein turnover, chaperones |
C | 214 | 6.1 | Energy production and conversion |
G | 321 | 9.2 | Carbohydrate transport and metabolism |
E | 372 | 10.6 | Amino acid transport and metabolism |
F | 78 | 2.2 | Nucleotide transport and metabolism |
H | 137 | 3.9 | Coenzyme transport and metabolism |
I | 152 | 4.3 | Lipid transport and metabolism |
P | 163 | 4.7 | Inorganic ion transport and metabolism |
Q | 107 | 3.1 | Secondary metabolites biosynthesis, transport and catabolism |
R | 439 | 12.5 | General function prediction only |
S | 378 | 10.8 | Function unknown |
- | 907 | 22.1 | Not in COGs |