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Table 4. Number of genes associated with the general COG functional categories

From: Genome sequence of the Wenxinia marina type strain (DSM 24838T), a representative of the Roseobacter group isolated from oilfield sediments

Code Value %age Description
J 170 4.9 Translation, ribosomal structure and biogenesis
A 3 0.1 RNA processing and modification
K 203 5.8 Transcription
L 153 4.4 Replication, recombination and repair
B 3 0.1 Chromatin structure and dynamics
D 27 0.8 Cell cycle control, cell division, chromosome partitioning
Y 0 0.0 Nuclear structure
V 40 1.1 Defense mechanisms
T 139 4.0 Signal transduction mechanisms
M 201 5.7 Cell wall/membrane/envelope biogenesis
N 24 0.7 Cell motility
Z 0 0.0 Cytoskeleton
W 0 0.0 Extracellular structures
U 54 1.5 Intracellular trafficking and secretion, and vesicular transport
O 123 3.5 Posttranslational modification, protein turnover, chaperones
C 214 6.1 Energy production and conversion
G 321 9.2 Carbohydrate transport and metabolism
E 372 10.6 Amino acid transport and metabolism
F 78 2.2 Nucleotide transport and metabolism
H 137 3.9 Coenzyme transport and metabolism
I 152 4.3 Lipid transport and metabolism
P 163 4.7 Inorganic ion transport and metabolism
Q 107 3.1 Secondary metabolites biosynthesis, transport and catabolism
R 439 12.5 General function prediction only
S 378 10.8 Function unknown
- 907 22.1 Not in COGs