Table 3. Genome Statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 4,181,754 | 100.00 |
DNA coding region (bp) | 3,740,397 | 89.45 |
DNA G+C content (bp) | 2,948,333 | 70.50 |
Number of scaffolds | 8 | |
Total genes | 4,106 | 100.00 |
RNA genes | 59 | 1.44 |
rRNA operons | 2 | |
tRNA genes | 45 | 1.10 |
Protein-coding genes | 4,047 | 98.56 |
Genes with function prediction (proteins) | 3,303 | 80.44 |
Genes in paralog clusters | 3,408 | 83.00 |
Genes assigned to COGs | 3,199 | 77.91 |
Genes assigned Pfam domains | 3,379 | 82.29 |
Genes with signal peptides | 430 | 10.47 |
Genes with transmembrane helices | 904 | 22.02 |
CRISPR repeats | 0 |