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Table 5. Number of genes associated with the 25 general COG functional categories

From: Non contiguous-finished genome sequence and description of Clostridium jeddahense sp. nov.

Code

Value

% agea

Description

J

154

4.45

Translation

A

0

0

RNA processing and modification

K

296

8.55

Transcription

L

138

3.98

Replication, recombination and repair

B

1

0.03

Chromatin structure and dynamics

D

24

0.69

Cell cycle control, mitosis and meiosis

Y

0

0

Nuclear structure

V

73

2.11

Defense mechanisms

T

156

4.5

Signal transduction mechanisms

M

116

3.35

Cell wall/membrane biogenesis

N

62

1.79

Cell motility

Z

0

0

Cytoskeleton

W

0

0

Extracellular structures

U

48

1.38

Intracellular trafficking and secretion

O

66

1.9

Posttranslational modification, protein turnover, chaperones

C

154

4.45

Energy production and conversion

G

237

6.84

Carbohydrate transport and metabolism

E

328

9.47

Amino acid transport and metabolism

F

56

1.61

Nucleotide transport and metabolism

H

92

2.66

Coenzyme transport and metabolism

I

85

2.45

Lipid transport and metabolism

P

164

4.74

Inorganic ion transport and metabolism

Q

53

1.53

Secondary metabolites biosynthesis, transport and catabolism

R

346

10

General function prediction only

S

195

5.63

Function unknown

-

947

27.35

Not in COGs

  1. a The total is based on the total number of protein-coding genes in the annotated genome