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Table 5. Number of genes associated with the 25 general COG functional categories

From: Non contiguous-finished genome sequence and description of Clostridium jeddahense sp. nov.

Code Value % agea Description
J 154 4.45 Translation
A 0 0 RNA processing and modification
K 296 8.55 Transcription
L 138 3.98 Replication, recombination and repair
B 1 0.03 Chromatin structure and dynamics
D 24 0.69 Cell cycle control, mitosis and meiosis
Y 0 0 Nuclear structure
V 73 2.11 Defense mechanisms
T 156 4.5 Signal transduction mechanisms
M 116 3.35 Cell wall/membrane biogenesis
N 62 1.79 Cell motility
Z 0 0 Cytoskeleton
W 0 0 Extracellular structures
U 48 1.38 Intracellular trafficking and secretion
O 66 1.9 Posttranslational modification, protein turnover, chaperones
C 154 4.45 Energy production and conversion
G 237 6.84 Carbohydrate transport and metabolism
E 328 9.47 Amino acid transport and metabolism
F 56 1.61 Nucleotide transport and metabolism
H 92 2.66 Coenzyme transport and metabolism
I 85 2.45 Lipid transport and metabolism
P 164 4.74 Inorganic ion transport and metabolism
Q 53 1.53 Secondary metabolites biosynthesis, transport and catabolism
R 346 10 General function prediction only
S 195 5.63 Function unknown
- 947 27.35 Not in COGs
  1. a The total is based on the total number of protein-coding genes in the annotated genome