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Table 6. Comparison of the percentage of genes associated with the 25 general COG functional categories for Anaerococcus provenciensis and Anaerococcus prevotii DSM 20548.

From: Non-contiguous finished genome sequence and description of Anaerococcus provenciensis sp. nov.

Code

A. provenciensis % of total

A. prevotii % of total

Difference (in %)

COG description

J

6.76

7.53

-0.77

Translation

A

0.18

0.10

0.08

RNA processing and modification

K

7.74

6.91

0.83

Transcription

L

7.92

6.13

1.79

Replication, recombination and repair

B

0.18

0.16

0.02

Chromatin structure and dynamics

D

1.78

1.56

0.22

Cell cycle control, mitosis and meiosis

Y

0

0.05

−0.05

Nuclear structure

V

4.09

3.43

0.66

Defense mechanisms

T

3.65

3.17

0.48

Signal transduction mechanisms

M

4.41

5.24

−0.83

Cell wall/membrane biogenesis

N

0.62

0.36

0.26

Cell motility

Z

0.22

0.16

0.06

Cytoskeleton

W

0

0

0

Extracellular structures

U

2.27

1.92

0.35

Intracellular trafficking and secretion

O

3.48

3.63

−0.15

Posttranslational modification, protein turnover, chaperones

C

5.78

6.59

−0.81

Energy production and conversion

G

9.83

8.41

1.42

Carbohydrate transport and metabolism

E

5.56

6.65

−1.09

Amino acid transport and metabolism

F

2.85

3.69

−0.84

Nucleotide transport and metabolism

H

2.62

3.58

−0.96

Coenzyme transport and metabolism

I

2.27

2.34

−0.07

Lipid transport and metabolism

P

5.65

6.80

−1.15

Inorganic ion transport and metabolism

Q

0.75

0.78

−0.03

Secondary metabolites biosynthesis, transport and catabolism

R

10.6

11.21

−0.61

General function prediction only

S

9.79

9.61

0.18

Function unknown

-

0.98

0.99

−0.01

Not in COGs

  1. Table 6 presents the difference in gene numbers (in percentage) from each COG category between Anaerococcus provenciensis and Anaerococcus prevotii DSM 20548. The totals are highly similar in the two species. The biggest difference is in the COG “Carbohydrate Metabolism and transportation” category, which does not exceed 1.42%.