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Table 1. Classification and general features of D. gibsoniae strain GrollT (DSM 7213) according to the MIGS recommendations [5].

From: Genome analysis of Desulfotomaculum gibsoniae strain GrollT a highly versatile Gram-positive sulfate-reducing bacterium

MIGS ID

Property

Term

Evidence codea

 

Current classification

Domain Bacteria

TAS [6]

  

Phylum Firmicutes

TAS [6–8]

  

Class Clostridia

TAS [9,10]

  

Order Clostridiales

TAS [11,12]

  

Family Peptococcaceae

TAS [11,13]

  

Genus Desulfotomaculum

TAS [11,14,15]

  

Species Desulfotomaculum gibsoniae

TAS [1]

  

Type strain Groll

 
 

Gram stain

Negative with a Gram-positive cell wall structure

TAS [1,2]

 

Cell shape

Straight or slightly curved rods with pointed ends

TAS [1,2]

 

Motility

Motile, but motility was lost during cultivation

TAS [1,2]

 

Sporulation

Spherical and central, slightly swelling the cell

TAS [1,2]

 

Temperature range

20–40°C

TAS [1,2]

 

Optimum temperature

35–37°C

TAS [1,2]

 

Carbon source

CO2 (autotrophic) and many organic compounds including aromatic compounds

TAS [1,2]

 

Energy source

Sulfate-dependent growth and fermentative growth with pyruvate, crotonate, formate, H2 + CO2, and methoxylated aromatic compounds

TAS [1,2]

 

Electron acceptor Habitat

Sulfate, thiosulfate and sulfite

TAS [1,2]

MIGS-6

 

Fresh water, mud, soil

TAS [1,2]

 

pH range

6.0–8.0

 

MIGS-6.2

Optimum pH

6.9–7.2

TAS [1,2]

MIGS-6.3

Salinity

0–35 g l−1, no addition of NaCl necessary

TAS [1,2]

MIGS-22

Oxygen

Obligate anaerobe

TAS [1,2]

MIGS-15

Biotic relationship

Free living

TAS [1,2]

MIGS-14

Pathogenicity

BSF 1 [16]

 

MIGS-4

Geographic location

Grolland, Bremen, Germany

TAS [1,2]

MIGS-5

Sample collection time

Spring 1989

 

MIGS-4.1

Latitude

53.058 N

 

MIGS-4.2

Longitude

8.762 E

 

MIGS-4.3

Depth

60 cm (water), 1 cm sediment

 
  1. Evidence codes - TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). Evidence codes are from the Gene Ontology project [17].