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Table 1. Classification and general features of P. staleyi ATCC 27377T in accordance with the MIGS recommendations [11]

From: Complete genome sequence of Pirellula staleyi type strain (ATCC 27377T)

MIGS ID

Property

Term

Evidence code

 

Current classification

Domain Bacteria

 
 

Phylum Planctomycetes

TAS [13]

 

Class “Planctomycea

TAS [13]

 

Order Planctomycetales

TAS [1417]

 

Family Planctomycetaceae

TAS [14,15]

 

Genus Pirellula

TAS [9,10]

 

Species Pirellula staleyi

TAS [10,15]

 

Type strain ICPB 4128

TAS [6]

 

Gram stain

negative

TAS [6]

 

Cell shape

pear or teardrop shaped

TAS [6]

 

Motility

with flagella

TAS [6]

 

Sporulation

sporulation has not been reported

NAS [6,10]

 

Temperature range

mesophile, range has not been determined

TAS [10,18]

 

Optimum temperature

20–25°C

TAS [10,19]

 

Salinity

50% artificial seawater (100% ASW = 34.5‰ salinity)

TAS [6,10]

MIGS-22

Oxygen requirement

aerobic

NAS [6,10]

 

Carbon source

Fucose, pectin, lactose, maltose, melibiose, raffinose, sucrose, and trehalose

TAS [6,10]

 

Energy source

carbohydrates

TAS [6,10]

MIGS-6

Habitat

aquatic

TAS [20]

MIGS-15

Biotic relationship

free-living, but also attached to filamentous algae and cyanobacteria

TAS [20]

MIGS-14

Pathogenicity

non pathogenic

NAS

 

Biosafety level

1

TAS [21]

 

Isolation

fresh and brackish water

TAS [6,20]

MIGS-4

Geographic location

Lake Lansing, Michigan, USA

TAS [20]

MIGS-5

Sample collection time

early 1970s

TAS [20]

MIGS-4.1

Latitude, Longitude

42.759, −84.399

NAS

MIGS-4.2

MIGS-4.3

Depth

not reported

 

MIGS-4.4

Altitude

not reported

 
  1. Evidence codes - IDA: Inferred from Direct Assay (first time in publication); TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [19]. If the evidence code is IDA, then the property was directly observed for a living isolate by one of the authors, or an expert mentioned in the acknowledgements.