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Table 3. Genome Statistics

From: Genome sequence of the mud-dwelling archaeon Methanoplanus limicola type strain (DSM 2279T), reclassification of Methanoplanus petrolearius as Methanolacinia petrolearia and emended descriptions of the genera Methanoplanus and Methanolacinia

Attribute

Value

% of Totala

Genome size (bp)

3,200,946

100.00%

DNA coding region (bp)

2,799,644

87.46%

DNA G+C content (bp)

1,350,606

42.20%

Number of replicons

1

 

Extrachromosomal elements

0

 

Total genes

3,129

100.00%

RNA genes

65

2.08%

rRNA operons

1b

 

tRNA genes

56

1.79%

Protein-coding genes

3,064

97.92%

Pseudo genes

122

3.90%

Genes with function prediction (proteins)

1,901

60.75%

Genes in paralog clusters

1,568

50.11%

Genes assigned to COGs

2,204

70.44%

Genes assigned Pfam domains

2,149

68.68%

Genes with signal peptides

129

4.12%

Genes with transmembrane helices

748

23.91%

CRISPR repeats

0

 
  1. aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome
  2. bbut five genes for 5S rRNA