Table 4. Number of genes associated with the general COG functional categories.
Code | Value | %age | Description |
|---|---|---|---|
J | 159 | 4.7 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.0 | RNA processing and modification |
K | 283 | 8.4 | Transcription |
L | 190 | 5.7 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 22 | 0.6 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 99 | 2.9 | Defense mechanisms |
T | 197 | 5.9 | Signal transduction mechanisms |
M | 274 | 8.1 | Cell wall/membrane biogenesis |
N | 7 | 0.2 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 63 | 1.9 | Intracellular trafficking and secretion, and vesicular transport |
O | 120 | 3.6 | Posttranslational modification, protein turnover, chaperones |
C | 168 | 5.0 | Energy production and conversion |
G | 259 | 7.7 | Carbohydrate transport and metabolism |
E | 211 | 6.3 | Amino acid transport and metabolism |
F | 61 | 1.8 | Nucleotide transport and metabolism |
H | 148 | 4.4 | Coenzyme transport and metabolism |
I | 107 | 3.2 | Lipid transport and metabolism |
P | 238 | 7.1 | Inorganic ion transport and metabolism |
Q | 52 | 1.5 | Secondary metabolites biosynthesis, transport and catabolism |
R | 419 | 12.5 | General function prediction only |
S | 280 | 8.3 | Function unknown |
- | 1,503 | 32.9 | Not in COGs |