Skip to main content

Advertisement

Table 5. Number of genes associated with the 25 general COG functional categories

From: Non-contiguous finished genome sequence and description of Kurthia senegalensis sp. nov.

Code Value %age Description
J 164 5.68 Translation
A 0 0 RNA processing and modification
K 201 6.96 Transcription
L 128 4.43 Replication, recombination and repair
B 1 0.03 Chromatin structure and dynamics
D 34 1.18 Cell cycle control, mitosis and meiosis
Y 0 0 Nuclear structure
V 44 1.52 Defense mechanisms
T 148 5.12 Signal transduction mechanisms
M 116 4.02 Cell wall/membrane biogenesis
N 70 2.42 Cell motility
Z 0 0 Cytoskeleton
W 0 0 Extracellular structures
U 40 1.38 Intracellular trafficking and secretion
O 81 2.80 Posttranslational modification, protein turnover, chaperones
C 117 4.05 Energy production and conversion
G 117 4.05 Carbohydrate transport and metabolism
E 264 9.14 Amino acid transport and metabolism
F 71 2.46 Nucleotide transport and metabolism
H 104 3.60 Coenzyme transport and metabolism
I 109 3.77 Lipid transport and metabolism
P 180 6.23 Inorganic ion transport and metabolism
Q 62 2.15 Secondary metabolites biosynthesis, transport and catabolism
R 378 13.08 General function prediction only
S 222 7.68 Function unknown
X 617 21.36 Not in COGs
  1. The total is based on the total number of protein coding genes in the annotated genome.