Genome sequence of the acid-tolerant Burkholderia sp. strain WSM2232 from Karijini National Park, Australia

Walker, Robert; Watkin, Elizabeth; Tian, Rui; Bräu, Lambert; O’Hara, Graham; Goodwin, Lynne; Han, James; Reddy, Tatiparthi; Huntemann, Marcel; Pati, Amrita; Woyke, Tanja; Mavromatis, Konstantinos; Markowitz, Victor; Ivanova, Natalia; Kyrpides, Nikos; Reeve, Wayne

doi:10.4056/sigs.5018795

Environmental Microbiome

Table 3. Reduction of tetrazolium dye by NADH produced by respiring cells of Burkholderia sp. WSM2232 in the Biolog Phenotype Microarray

From: Genome sequence of the acid-tolerant Burkholderia sp. strain WSM2232 from Karijini National Park, Australia

PM1 plate Compound		PM2 plate Compound		PM3 plate Compound
L-Arabinose	+	Chondroitin Sulfate C	−	Ammonia	+
N-Acetyl-D Glucosamine	+	α-Cyclodextrin	−	Nitrite	+
D-Saccharic Acid	+	β-Cyclodextrin	−	Nitrate	+
Succinic Acid	+	γ-Cyclodextrin	−	Urea	+
D-Galactose	+	Dextrin	+	Biuret	−
L-Aspartic Acid	+	Gelatin	−	L-Alanine	+
L-Proline	+	Glycogen	−	L-Arginine	+
D-Alanine	+	Inulin	−	L-Asparagine	+
D-Trehalose	+	Laminarin	−	L-Aspartic Acid	+
D-Mannose	+	Mannan	−	L-Cysteine	+
Dulcitol	+	Pectin	−	L-Glutamic Acid	+
D-Serine	−	N-Acetyl-D-Galactosamine	+	L-Glutamine	+
D-Sorbitol	+	N-Acetyl-Neuraminic Acid	−	Glycine	+
Glycerol	+	β-D-Allose	−	L-Histidine	+
L-Fucose	+	Amygdalin	−	L-Isoleucine	+
D-Glucuronic Acid	+	D-Arabinose	+	L-Leucine	+
D-Gluconic Acid	+	D-Arabitol	+	L-Lysine	+
D,L-α-Glycerol-Phosphate	+	L-Arabitol	+	L-Methionine	+
D-Xylose	+	Arbutin	−	L-Phenylalanine	+
L-Lactic Acid	+	2-Deoxy-D-Ribose	+	L-Proline	+
Formic Acid	+	I-Erythritol	−	L-Serine	+
D-Mannitol	+	D-Fucose	+	L-Threonine	+
L-Glutamic Acid	+	3-0-β-D-Galacto-pyranosyl-DArabinose	−	L-Tryptophan	+
D-Glucose-6-Phosphate	+	Gentiobiose	−	L-Tyrosine	+
D-Galactonic Acid-γ-Lactone	+	L-Glucose	−	L-Valine	+
D,L-Malic Acid	+	Lactitol	−	D-Alanine	+
D-Ribose	+	D-Melezitose	−	D-Asparagine	+
Tween 20	+	Maltitol	−	D-Aspartic Acid	+
L-Rhamnose	+	α-Methyl-D-Glucoside	−	D-Glutamic Acid	+
D-Fructose	+	β-Methyl-D-Galactoside	+	D-Lysine	+
Acetic Acid	+	3-Methyl Glucose	−	D-Serine	+
α-D-Glucose	+	β-Methyl-D-Glucuronic Acid	−	D-Valine	+
Maltose	−	α-Methyl-D-Mannoside	−	L-Citrulline	+
D-Melibiose	−	β-Methyl-D-Xyloside	−	L-Homoserine	+
Thymidine	−	Palatinose	−	L-Ornithine	+
L-Asparagine	+	D-Raffinose	−	N-Acetyl-D,L-Glutamic Acid	+
D-Aspartic Acid	−	Salicin	−	N-Phthaloyl-L-Glutamic Acid	−
D-Glucosaminic Acid	+	Sedoheptulosan	−	L-Pyroglutamic Acid	+
1,2-Propanediol	−	L-Sorbose	−	Hydroxylamine	+
Tween 40	+	Stachyose	−	Methylamine	+
α-Keto-Glutaric Acid	+	D-Tagatose	+	N-Amylamine	+
α-Keto-Butyric Acid	+	Turanose	+	N-Butylamine	+
α-Methyl-D-Galactoside	−	Xylitol	+	Ethylamine	−
α-D-Lactose	−	N-Acetyl-D-Glucosaminitol	+	Ethanolamine	+
Lactulose	+	γ-Amino Butyric Acid	+	Ethylenediamine	−
Sucrose	−	δ-Amino Valeric Acid	+	Putrescine	+
Uridine	+	Butyric Acid	+	Agmatine	−
L-Glutamine	+	Capric Acid	−	Histamine	−
M-Tartaric Acid	+	Caproic Acid	+	β-Phenylethylamine	+
D-Glucose-1-Phosphate	+	Citraconic Acid	+	Tyramine	−
D-Fructose-6-Phosphate	+	Citramalic Acid	+	Acetamide	+
Tween 80	+	D-Glucosamine	+	Formamide	+
α-Hydroxy Glutaric Acid-γ-Lactone	−	2-Hydroxy Benzoic Acid	−	Glucuronamide	+
α-Hydroxy Butyric Acid	+	4-Hydroxy Benzoic Acid	+	D,L-Lactamide	+
β-Methyl-D-Glucoside	−	β-Hydroxy Butyric Acid	+	D-Glucosamine	+
Adonitol	+	γ-Hydroxy Butyric Acid	+	DGalactosamine	+
Maltotriose	−	α-Keto Valeric Acid	−	DMannosamine	+
2-Deoxy Adenosine	−	Itaconic Acid	−	N-Acetyl-D-Glucosamine	+
Adenosine	+	5-Keto-D-Gluconic Acid	−	N-Acetyl-D-Galactosamine	−
Glycy-L-Aspartic Acid	+	D-Lactic Acid Methyl Ester	+	N-Acetyl-D-Mannosamine	−
Citric Acid	+	Malonic Acid	+	Adenine	+
M-Inositol	+	Melibionic Acid	+	Adenosine	+
D-Threonine	−	Oxalic Acid	+	Cytidine	+
Fumaric Acid	+	Oxalomalic Acid	+	Cytosine	+
Bromo Succinic Acid	+	Quinic Acid	+	Guanine	−
Propionic Acid	+	D-Ribono-1,4-Lactone	−	Guanosine	+
Mucic Acid	+	Sebacic Acid	+	Thymine	+
Glycolic Acid	−	Sorbic Acid	+	Thymidine	−
Glyoxylic Acid	+	Succinamic Acid	+	Uracil	+
D-Cellobiose	−	D-Tartaric Acid	+	Uridine	+
Inosine	+	L-Tartari c Acid	+	Inosine	+
Glycyl-L-Glutamic Acid	+	Acetamide	−	Xanthine	+
Tricarballylic Acid	+	L-Alaninamide	+	Xanthosine	+
L-Serine	+	N-Acetyl-L-Glutamic Acid	+	Uric Acid	+
L-Threonine	+	L-Arginine	+	Alloxan	+
L-Alanine	+	Glycine	−	Allantoin	+
L-Allnyl-Glycine	+	L-Histidine	+	Parabanic Acid	+
Acetoacetic Acid	+	L-Homoserine	+	D,L-α-Amino-N-Butyric Acid	+
N-Acetyl-β-D-Mannosamine	−	Hydroxy-L-Proline	+	γ-Amino-N-Butyric Acid	+
Mono Methyl Succinate	+	L-Isoleucine	+	ε-Amino-N-Caproic Acid	−
Methyl Pyruvate	+	L-Leucine	+	D,L-α-Amino-Caprylic Acid	−
D-Malic Acid	+	L-Lysine	+	δ-Amino-N-Valeric Acid	+
L-Malic Acid	+	L-Methionine	−	α-Amino-N-Valeric Acid	+
Glycyl-L-Proline	+	L-Ornithine	+	Ala-Asp	+
p-Hydroxy Phenyl Acetic Acid	+	L-Phenylalanine	+	Ala-Gln	+
m-Hydroxy Phenyl Acetic Acid	−	L-Pyroglutamic Acid	+	Ala-Glu	+
Tyramine	−	L-Valine	+	Ala-Gly	+
D-Psicose	−	D,L-Carnitine	+	Ala-His	+
L-Lyxose	+	Sec-Butylamine	−	Ala-Leu	+
Glucuronamide	−	D,L-Octopamine	−	Ala-Thr	+
Pyruvic Acid	+	Putrescine	−	Gly-Asn	+
L-Galactonic Acid-γ-Lactone	+	Dihydroxy Acetone	−	Gly-Gln	+
D-Galacturonic Acid	+	2,3-Butanediol	+	Gly-Glu	+
Phenylethylamine	+	2,3-Butanone	+	Gly-Met	+
2-Aminoethanol	+	3-Hydrox y-2-Butanone	−	Met-Ala	+

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ISSN: 2524-6372

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