Table 5. Publicly available Roseobacter clade genomes use for comparative analysis with strain HIMB11, as of IMG release 3.4.
Organism name | Status | Size (bp) | Gene Count | GC% |
|---|---|---|---|---|
Citreicella sp. SE45 | Draft | 5,523,231 | 5,499 | 67 |
Dinoroseobacter shibae DFL-12, DSM 16493 | Finished | 4,417,868 | 4,271 | 66 |
Jannaschia sp. CCS1 | Finished | 4,404,049 | 4,339 | 62 |
Loktanella sp. CCS2 | Draft | 3,497,325 | 3,703 | 55 |
Loktanella vestfoldensis SKA53 | Draft | 3,063,691 | 3,117 | 60 |
Maritimibacter alkaliphilus HTCC2654 | Draft | 4,529,231 | 4,763 | 64 |
Oceanibulbus indolifex HEL-45 | Draft | 4,105,524 | 4,208 | 60 |
Oceanicola batsensis HTCC2597 | Draft | 4,437,668 | 4,261 | 66 |
Oceanicola granulosus HTCC2516 | Draft | 4,039,111 | 3,855 | 70 |
Octadecabacter antarcticus 238 | Draft | 5,393,715 | 5,883 | 55 |
Octadecabacter antarcticus 307 | Draft | 4,909,025 | 5,544 | 55 |
Pelagibaca bermudensis HTCC2601 | Draft | 5,425,920 | 5,519 | 66 |
Phaeobacter gallaeciensis 2.10 | Draft | 4,157,399 | 4,017 | 60 |
Phaeobacter gallaeciensis BS107 | Draft | 4,232,367 | 4,136 | 60 |
Rhodobacterales sp. HTCC2083 | Draft | 4,018,415 | 4,226 | 53 |
Rhodobacterales sp. HTCC2150 | Draft | 3,582,902 | 3,713 | 49 |
Rhodobacterales sp. Y4I | Draft | 4,344,244 | 4,206 | 64 |
Rhodobacterales sp. HTCC2255 | Draft | 2,224,475 | 2,209 | 37 |
Roseobacter denitrificans OCh 114 | Finished | 4,331,234 | 4,201 | 59 |
Roseobacter sp. AzwK-3b | Draft | 4,178,704 | 4,197 | 62 |
Roseobacter sp. MED193 | Draft | 4,652,716 | 4,605 | 57 |
Roseobacter sp. SK209-2-6 | Draft | 4,555,826 | 4,610 | 57 |
Roseovarius nubinhibens ISM | Draft | 3,668,667 | 3,605 | 64 |
Roseovarius sp. 217 | Draft | 4,762,632 | 4,823 | 61 |
Roseovarius sp. TM1035 | Draft | 4,209,812 | 4,158 | 61 |
Ruegeria pomeroyi DSS-3 | Finished | 4,601,053 | 4,355 | 64 |
Ruegeria sp. KLH11 | Draft | 4,487,498 | 4,338 | 58 |
Ruegeria sp. TM1040 | Finished | 4,153,699 | 3,964 | 60 |
Sagittula stellata E-37 | Draft | 5,262,893 | 5,121 | 65 |
Silicibacter lacuscaerulensis ITI-1157 | Draft | 3,523,710 | 3,677 | 63 |
Silicibacter sp. TrichCH4B | Draft | 4,689,084 | 4,814 | 59 |
Sulfitobacter sp. EE-36 | Draft | 3,547,243 | 3,542 | 60 |
Sulfitobacter sp. GAI101 | Draft | 4,527,951 | 4,258 | 59 |
Sulfitobacter sp. NAS-14.1 | Draft | 4,002,069 | 4,026 | 60 |
Thalassiobium sp. R2A62 | Draft | 3,487,925 | 3,744 | 55 |