Table 4. Number of genes associated with the 25 general COG functional categories
Code | Value | %agea | Description |
|---|---|---|---|
J | 158 | 5.6 | Translation |
A | 0 | 0 | RNA processing and modification |
K | 159 | 5.7 | Transcription |
L | 104 | 3.7 | Replication, recombination and repair |
B | 3 | 0.1 | Chromatin structure and dynamics |
D | 24 | 0.9 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0 | Nuclear structure |
V | 22 | 0.8 | Defense mechanisms |
T | 74 | 2.6 | Signal transduction mechanisms |
M | 133 | 4.7 | Cell wall/membrane biogenesis |
N | 40 | 1.4 | Cell motility |
Z | 0 | 0 | Cytoskeleton |
W | 0 | 0 | Extracellular structures |
U | 38 | 1.4 | Intracellular trafficking and secretion |
O | 118 | 4.2 | Posttranslational modification, protein turnover, chaperones |
C | 196 | 7.0 | Energy production and conversion |
G | 165 | 5.9 | Carbohydrate transport and metabolism |
E | 334 | 11.9 | Amino acid transport and metabolism |
F | 73 | 2.6 | Nucleotide transport and metabolism |
H | 157 | 5.6 | Coenzyme transport and metabolism |
I | 154 | 5.5 | Lipid transport and metabolism |
P | 112 | 4.0 | Inorganic ion transport and metabolism |
Q | 123 | 4.4 | Secondary metabolites biosynthesis, transport and catabolism |
R | 379 | 13.5 | General function prediction only |
S | 238 | 8.5 | Function unknown |
- | 714 | 22.06 | Not in COGs |