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Table 3. Nucleotide content and gene count levels of the genome

From: Draft genome sequence of marine alphaproteobacterial strain HIMB11, the first cultivated representative of a unique lineage within the Roseobacter clade possessing an unusually small genome

Attribute

Value

% of totala

Genome size (bp)

3,098,747

100.00

DNA coding region (bp)

2,812,982

90.78

DNA G+C content (bp)

1,541,077

49.73

Total genes

3,237

100.00

RNA genes

54

1.67

Protein-coding genes

3,183

98.33

Genes in paralog clusters

  

Genes assigned to COGs

2,523

77.94

1 or more conserved domains

  

2 or more conserved domains

  

3 or more conserved domains

  

4 or more conserved domains

  

Genes with signal peptides

919

28.39

Genes with transmembrane helices

654

20.20

Paralogous groups

  
  1. a) The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome.