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Table 5. Number of protein coding genes of Rhizobium leguminosarum bv. trifolii strain WSM1689 associated with the general COG functional categories.

From: Genome sequence of Rhizobium leguminosarum bv trifolii strain WSM1689, the microsymbiont of the one flowered clover Trifolium uniflorum

Code

Value

%age

COG Category

J

205

3.40

Translation, ribosomal structure and biogenesis

A

0

0.00

RNA processing and modification

K

581

9.62

Transcription

L

153

2.53

Replication, recombination and repair

B

2

0.03

Chromatin structure and dynamics

D

39

0.65

Cell cycle control, mitosis and meiosis

Y

0

0.00

Nuclear structure

V

66

1.09

Defense mechanisms

T

311

5.15

Signal transduction mechanisms

M

329

5.45

Cell wall/membrane biogenesis

N

81

1.34

Cell motility

Z

0

0.00

Cytoskeleton

W

0

0.00

Extracellular structures

U

82

1.36

Intracellular trafficking and secretion

O

187

3.10

Posttranslational modification, protein turnover, chaperones

C

311

5.15

Energy production conversion

G

683

11.31

Carbohydrate transport and metabolism

E

629

10.42

Amino acid transport metabolism

F

105

1.74

Nucleotide transport and metabolism

H

192

3.18

Coenzyme transport and metabolism

I

222

3.68

Lipid transport and metabolism

P

297

4.92

Inorganic ion transport and metabolism

Q

147

2.43

Secondary metabolite biosynthesis, transport and catabolism

R

795

13.17

General function prediction only

S

620

10.27

Function unknown

-

1,398

20.56

Not in COGS

-

6,037

-

Total