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Table 4. Number of genes associated with the general COG functional categories

From: Draft genome sequence of Bacillus amyloliquefaciens HB-26

Code

Value

% age

Description

J

130

3.160

Translation, ribosomal structure and biogenesis

A

0

0.0

RNA processing and modification

K

262

6.368

Transcription

L

122

2.965

Replication, recombination and repair

B

1

0.024

Chromatin structure and dynamics

D

34

0.826

Cell cycle control, cell division, chromosome partitioning

Y

0

0

Nuclear structure

V

52

1.264

Defense mechanisms

T

153

3.719

Signal transduction mechanisms

M

182

4.424

Cell wall/membrane/envelope biogenesis

N

53

1.288

Cell motility

Z

0

0.000

Cytoskeleton

W

1

0.024

Extracellular structures

U

43

1.045

Intracellular trafficking, secretion, and vesicular transport

O

97

2.358

Posttranslational modification, protein turnover, chaperones

C

177

4.302

Energy production and conversion

G

249

6.053

Carbohydrate transport and metabolism

E

340

8.264

Amino acid transport and metabolism

F

79

1.920

Nucleotide transport and metabolism

H

123

2.990

Coenzyme transport and metabolism

I

117

2.844

Lipid transport and metabolism

P

205

4.983

Inorganic ion transport and metabolism

Q

116

2.820

Secondary metabolites biosynthesis, transport and catabolism

R

435

10.574

General function prediction only

S

287

6.976

Function unknown

 

856

20.81

Not in COGs

  1. aThe total is based on the total number of protein coding genes in the annotated genome.