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Table 3. Genome Statistics

From: Draft genome sequence of Bacillus amyloliquefaciens HB-26

Attribute

Value

% of total

Genome size (bp)

3,989,358

100.00

DNA coding region (bp)

3,486,615

87.39

DNA G+C content (bp)

1,889,758

47.37

Number of scaffolds

39

-

Extrachromosomal elements

unknown

-

Total genes

4,114

100.00

tRNA genes

76

1.85

rRNA genes

4

0.1

rRNA operons

0b

-

Protein-coding genes

4,001

97.25

Pseudo gene (Partial genes)

0 (36)

0 (0.87%)

Genes with function prediction (proteins)

2224

54.06%

Genes assigned to COGs

2,336

56.78%

Genes with signal peptides

328

7.97

CRISPR repeats

0

0

  1. aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome.
  2. bNone of the rRNA operons appears to be complete due to unresolved assembly problems.