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Table 5. Number of protein coding genes of Ensifer medicae strain WSM1115 associated with the general COG functional categories.

From: Genome sequence of Ensifer medicae strain WSM1115; an acid-tolerant Medicago-nodulating microsymbiont from Samothraki, Greece

Code

Value

%age

COG Category

J

186

3.23

Translation, ribosomal structure and biogenesis

A

0

0.00

RNA processing and modification

K

527

9.16

Transcription

L

269

4.68

Replication, recombination and repair

B

3

0.05

Chromatin structure and dynamics

D

43

0.75

Cell cycle control, mitosis and meiosis

Y

0

0.00

Nuclear structure

V

55

0.96

Defense mechanisms

T

244

4.24

Signal transduction mechanisms

M

272

4.73

Cell wall/membrane biogenesis

N

68

1.18

Cell motility

Z

0

0.00

Cytoskeleton

W

1

0.02

Extracellular structures

U

112

1.95

Intracellular trafficking and secretion

O

195

3.39

Posttranslational modification, protein turnover, chaperones

C

335

5.82

Energy production conversion

G

575

10.00

Carbohydrate transport and metabolism

E

609

10.59

Amino acid transport metabolism

F

106

1.84

Nucleotide transport and metabolism

H

194

3.37

Coenzyme transport and metabolism

I

205

3.56

Lipid transport and metabolism

P

286

4.97

Inorganic ion transport and metabolism

Q

164

2.85

Secondary metabolite biosynthesis, transport and catabolism

R

726

12.62

General function prediction only

S

577

10.03

Function unknown

-

1,704

24.80

Not in COGS

-

5,752

 

Total