Table 2. Genome sequencing project information
From: Complete genome sequence of Stackebrandtia nassauensis type strain (LLR-40K-21T)
MIGS ID | Property | Term |
|---|---|---|
MIGS-31 | Finishing quality | Finished |
MIGS-28 | Libraries used | Two genomic libraries: 8kb pMCL200 and fosmid pcc1Fos Sanger libraries. One 454 pyrosequence standard library |
MIGS-29 | Sequencing platforms | ABI3730, 454 GS FLX |
MIGS-31.2 | Sequencing coverage | 11.0Ă— Sanger; 29Ă— pyrosequence |
MIGS-30 | Assemblers | Newbler version 1.1.02.15, phrap |
MIGS-32 | Gene calling method | Prodigal 1.4, GenePRIMP |
| Â | INSDC ID | CP001778 |
| Â | Genbank Date of Release | not yet |
| Â | GOLD ID | Gc01107 |
| Â | NCBI project ID | 19713 |
| Â | Database: IMG-GEBA | 2501939631 |
MIGS-13 | Source material identifier | DSM 44728 |
| Â | Project relevance | Tree of Life, GEBA |