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Table 1. Classification and general features of B. amyloliquefaciens subsp. plantarum UCMB5033 according to the MIGS recommendation [8].

From: Complete genome sequence of a plant associated bacterium Bacillus amyloliquefaciens subsp. plantarum UCMB5033

MIGS ID

Property

Term

Evidence codea

 

Classification

Domain Bacteria

TAS [9]

 

Phylum Firmicutes

TAS [1012]

 

Class Bacilli

TAS [13,14]

 

Order Bacillales

TAS [15,16]

 

Family Bacillaceae

TAS [15,17]

 

Genus Bacillus

TAS [15,18,19]

 

Species Bacillus amyloliquefaciens

TAS [2022]

 

Strain UCMB5033

 
 

Gram stain

Positive

IDA

 

Cell shape

Rod-shaped

IDA

 

Motility

Motile

IDA

 

Sporulation

Sporulating

IDA

 

Temperature range

Mesophilic

IDA

 

Optimum temperature

28°C

IDA

 

Carbon source

Glucose, fructose, trehalose, mannitol, sucrose, arabinose, raffinose

IDA

 

Energy source

--

 
 

Terminal electron receptor

--

 

MIGS-6

Habitat

Soil, Host (Plant)

IDA

MIGS-6.3

Salinity

up to 12% w/v

TAS [20,21]

MIGS-22

Oxygen

Aerobic

IDA

MIGS-15

Biotic relationship

Symbiotic (beneficial)

TAS [2]

MIGS-14

Pathogenicity

None

NAS

MIGS-4

Geographic location

Tajikistan

 

MIGS-5

Sample collection time

--

 

MIGS-4.1

Latitude

--

 

MIGS-4.2

Longitude

--

 

MIGS-4.3

Depth

--

 

MIGS-4.4

Altitude

--

 
  1. a) Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [23].