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Table 4. Nucleotide content and gene count levels of the genome

From: Non-contiguous finished genome sequence and description of Alistipes ihumii sp. nov.

Attribute

Value

% of totala

Genome size (bp)

2,753,264

 

DNA coding region (bp)

2,320,878

84.29

DNA G+C content (bp)

1,594,140

57.90

Number of replicons

1

 

Extrachromosomal elements

0

 

Total genes

2,301

100

RNA genes

47

2.04

rRNA operons

1

 

Protein-coding genes

2,254

97.95

Genes with function prediction

1,540

66.92

Genes assigned to COGs

1,465

63.66

Protein coding genes assigned Pfam domains

1,834

79.70

Genes with peptide signals

296

12.86

Genes with transmembrane helices

457

19.86

CRISPR repeats

1

 
  1. a The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome.