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Table 1. Classification and general features of Alistipes ihumii strain AP11T according to the MIGS recommendations [32]

From: Non-contiguous finished genome sequence and description of Alistipes ihumii sp. nov.

MIGS ID

Property

Term

Evidence codea

  

Domain Bacteria

TAS [33]

  

Phylum Bacteroidetes

TAS [34,35]

  

Class Bacteroidia

TAS [34,36]

  

Order Bacteroidales

TAS [34,37]

  

Family Rikenellaceae

TAS [34,38]

  

Genus Alistipes

TAS [28,39]

  

Species Alistipes ihumii

IDA

 

Current classification

Type strain AP11T

IDA

 

Gram stain

Negative

IDA

 

Cell shape

Rod

IDA

 

Motility

nonmotile

IDA

 

Sporulation

nonsporulating

IDA

 

Temperature range

mesophile

IDA

 

Optimum temperature

37°C

IDA

MIGS-6.3

Salinity

unknown

IDA

MIGS-22

Oxygen requirement

anaerobic

IDA

 

Carbon source

unknown

 
 

Energy source

unknown

 

MIGS-6

Habitat

human gut

IDA

MIGS-15

Biotic relationship

free living

IDA

 

Pathogenicity

unknown

 
 

Biosafety level

2

 

MIGS-14

Isolation

human feces

 

MIGS-4

Geographic location

France

IDA

MIGS-5

Sample collection time

November 2011

IDA

MIGS-4.1

Latitude & Longitude

43.296482 & 5.36978

IDA

MIGS-4.3

Depth

surface

IDA

MIGS-4.4

Altitude

0 m above sea level

IDA

  1. aEvidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [40]. If the evidence is IDA, then the property was directly observed for a live isolate by one of the authors or an expert mentioned in the acknowledgements.