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Table 2. Classification and general features of Agrobacterium radiobacter DSM 30147T according to the MIGS recommendations [27,28]

From: Genomic analysis of Agrobacterium radiobacter DSM 30147T and emended description of A. radiobacter (Beijerinck and van Delden 1902) Conn 1942 (Approved Lists 1980) emend. Sawada et al. 1993

MIGS ID

Property

Term

Evidence code

 

Current classification

Domain Bacteria

TAS [29]

 

Phylum Proteobacteria

TAS [28]

 

Class Alphaproteobacteria

TAS [30,31]

 

Order Rhizobiales

TAS [30,32]

 

Family Rhizobiaceae

TAS [21,33]

 

Genus Agrobacterium

TAS [2,21,22,33–35]

 

Species Agrobacterium radiobacter

TAS [21,22,33]

 

type strain DSM 30147T

TAS [1–3]

 

Gram stain

negative

TAS [22]

 

Cell shape

rod-shaped

TAS [22]

 

Motility

motile

IDA

 

Sporulation

non-sporulating

TAS [22]

 

Optimum temperature

25–28 °C

TAS [22]

 

Carbon source

arabinose, D-glucose, D-melibiose, D-ribose, D-sorbitol, gluconate, histidine, 4-hydroxybenzoate, 3-hydroxybutyrate, inositol, 2-ketogluconate, L-alanine, L-fucose, L-lactate, L-proline, L-rhamnose, malate, maltose, mannitol, mannose, N-acetyl glucosamine, propionate, salicin, sodium acetate and sucrose

 
 

L-alanine, L-fucose, L-lactate, L-proline, L-rhamnose, malate, maltose, mannitol, mannose, N-acetyl glucosamine, propionate, salicin, sodium acetate and sucrose

 
   

IDA

 

Energy source

chemoorganotroph

TAS [22]

 

Terminal electron receptor

molecular oxygen

TAS [22]

MIGS-6.2

pH

6–7

TAS [22]

MIGS-22

Oxygen

aerobic

TAS [22]

MIGS-15

Biotic relationship

free-living

NAS

MIGS-14

Pathogenicity

non-phytopathogenic level 1, in individual cases, some members of this species are suspected human pathogens

TAS [36]

Biosafety level

MIGS-4

Geographic location

not reported

 

MIGS-5

Sample collection time

1902

TAS [1]

MIGS-4.1

Latitude

not reported

TAS [1]

MIGS-4.2

Longitude

not reported

TAS [1]

MIGS-4.3

Depth

not reported

 

MIGS-4.4

Altitude

not reported

 
  1. Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement; NAS: Non-traceable Author Statement. These evidence codes are from the Gene Ontology project [37]. If the evidence is IDA, then the property was directly observed for a live isolate by one of the authors or an expert mentioned in the acknowledgements.