Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Rhodothermus marinus type strain (R-10T)
Code | value | % age | Description |
|---|---|---|---|
J | 138 | 4.7 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.0 | RNA processing and modification |
K | 132 | 4.5 | Transcription |
L | 120 | 4.1 | Replication, recombination and repair |
B | 2 | 0.1 | Chromatin structure and dynamics |
D | 27 | 0.9 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.0 | Nuclear structure |
V | 43 | 1.5 | Defense mechanisms |
T | 119 | 4.1 | Signal transduction mechanisms |
M | 152 | 5.2 | Cell wall/membrane biogenesis |
N | 51 | 1.8 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 61 | 1.1 | Intracellular trafficking and secretion |
O | 95 | 3.3 | Posttranslational modification, protein turnover, chaperones |
C | 133 | 4.6 | Energy production and conversion |
G | 155 | 5.3 | Carbohydrate transport and metabolism |
E | 188 | 6.5 | Amino acid transport and metabolism |
F | 67 | 2.3 | Nucleotide transport and metabolism |
H | 117 | 4.0 | Coenzyme transport and metabolism |
I | 80 | 2.8 | Lipid transport and metabolism |
P | 126 | 4.3 | Inorganic ion transport and metabolism |
Q | 60 | 2.1 | Secondary metabolites biosynthesis, transport and catabolism |
R | 288 | 9.9 | General function prediction only |
S | 176 | 6.0 | Function unknown |
- | 787 | 26.1 | Not in COGs |