Table 2. Genome sequencing project information
From: Complete genome sequence of Rhodothermus marinus type strain (R-10T)
MIGS ID | Property | Term |
|---|---|---|
MIGS-31 | Finishing quality | Finished |
MIGS-28 | Libraries used | Three genomic libraries: two Sanger libraries - 8 kb pMCL200 and fosmid pcc1Fos - and one 454 pyrosequence standard library |
MIGS-29 | Sequencing platforms | ABI3730, 454 GS FLX |
MIGS-31.2 | Sequencing coverage | 8.8× Sanger; 23.8 × pyrosequence |
MIGS-30 | Assemblers | Newbler version 1.1.02.15, phrap |
MIGS-32 | Gene calling method | Prodigal 1.4, GenePRIMP |
INSDC ID | CP001807 (chromosome) | |
CP001808 (plasmid) | ||
Genbank Date of Release | 2009/11/16 | |
GOLD ID | Gc01147 | |
NCBI project ID | 29281 | |
Database: IMG-GEBA | 2501533216 | |
MIGS-13 | Source material identifier | DSM 4252 |
Project relevance | Tree of Life, GEBA |