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Table 4. Nucleotide content and gene count levels of the genome

From: Non-contiguous finished genome sequence and description of Holdemania massiliensis sp. nov.

Attribute

Value

% of totala

Genome size (bp)

3,795,625

 

DNA coding region (bp)

3,333,369

87.82

DNA G+C content (bp)

1,787,739

47.10

Number of replicons

1

 

Extrachromosomal elements

0

 

Total genes

3,510

100

RNA genes

49

1.39

rRNA operons

1

 

Protein-coding genes

3,461

98.60

Genes with function prediction

2,652

75.56

Genes assigned to COGs

2,581

74.57

Genes with peptide signals

258

7.35

Genes with transmembrane helices

908

36.17

CRISPR repeats

7

 
  1. a The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome