Skip to main content

Table 1. Classification and general features of Holdemania massiliensis strain AP2T according to the MIGS recommendations [30]

From: Non-contiguous finished genome sequence and description of Holdemania massiliensis sp. nov.

MIGS ID

Property

Term

Evidence codea

 

Current classification

Domain Bacteria

TAS [31]

 

Phylum Firmicutes

TAS [32–34]

 

Class Erysipelotrichia

TAS [35,36]

 

Order Erysipelotrichales

TAS [36,37]

 

Family Erysipelotrichaceae

TAS [38]

 

Genus Holdemania

TAS [28]

 

Species Holdemania massiliensis

IDA

 

Type strain AP2T

IDA

 

Gram stain

positive

IDA

 

Cell shape

Bacillus

IDA

 

Motility

Not motile

IDA

 

Sporulation

Non-sporulating

IDA

 

Temperature range

Mesophile

IDA

 

Optimum temperature

37°C

IDA

MIGS-6.3

Salinity

Unknown

IDA

MIGS-22

Oxygen requirement

Anaerobic

IDA

 

Carbon source

Unknown

NAS

 

Energy source

Unknown

NAS

MIGS-6

Habitat

Human gut

IDA

MIGS-15

Biotic relationship

Free living

IDA

MIGS-14

Pathogenicity

Unknown

NAS

 

Biosafety level

2

 
 

Isolation

Human feces

 

MIGS-4

Geographic location

France

IDA

MIGS-5

Sample collection time

November 2011

IDA

MIGS-4.1

Latitude

43.296482

IDA

MIGS-4.1

Longitude

5.36978

IDA

MIGS-4.3

Depth

Surface

IDA

MIGS-4.4

Altitude

0 m above sea level

IDA

  1. Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [39]. If the evidence is IDA, then the property was directly observed for a live isolate by one of the authors or an expert mentioned in the acknowledgements.