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Table 5. Number of genes associated with the 25 general COG functional categories

From: Non-contiguous finished genome sequence and description of Halopiger goleamassiliensis sp. nov.

Code

Value

% agea

Description

J

166

4.31

Translation

A

1

0.003

RNA processing and modification

K

157

4.07

Transcription

L

113

2.93

Replication, recombination and repair

B

3

0.08

Chromatin structure and dynamics

D

18

0.47

Cell cycle control, mitosis and meiosis

Y

0

0

Nuclear structure

V

46

1.19

Defense mechanisms

T

128

3.32

Signal transduction mechanisms

M

74

1.92

Cell wall/membrane biogenesis

N

51

1.32

Cell motility

Z

0

0

Cytoskeleton

W

0

0

Extracellular structures

U

27

0.70

Intracellular trafficking and secretion

O

114

2.96

Post-translational modification, protein turnover, chaperones

C

168

4.36

Energy production and conversion

G

122

3.17

Carbohydrate transport and metabolism

E

266

6.90

Amino acid transport and metabolism

F

70

1.82

Nucleotide transport and metabolism

H

131

3.40

Coenzyme transport and metabolism

I

107

2.78

Lipid transport and metabolism

P

176

4.57

Inorganic ion transport and metabolism

Q

82

2.13

Secondary metabolites biosynthesis, transport and catabolism

R

510

13.23

General function prediction only

S

248

6.43

Function unknown

-

1408

36.53

Not in COGs

  1. a The total is based on the total number of protein coding genes in the annotated genome.