Table 5. Number of protein coding genes of Rhizobium leguminosarum bv. trifolii SRDI943 associated with the general COG functional categories.
From: Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain SRDI943
Code | Value | %age | COG Category |
|---|---|---|---|
J | 196 | 3.03 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.02 | RNA processing and modification |
K | 652 | 10.06 | Transcription |
L | 231 | 3.57 | Replication, recombination and repair |
B | 2 | 0.03 | Chromatin structure and dynamics |
D | 40 | 0.62 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.00 | Nuclear structure |
V | 76 | 1.17 | Defense mechanisms |
T | 373 | 5.76 | Signal transduction mechanisms |
M | 334 | 5.16 | Cell wall/membrane biogenesis |
N | 92 | 1.42 | Cell motility |
Z | 1 | 0.02 | Cytoskeleton |
W | 1 | 0.02 | Extracellular structures |
U | 95 | 1.47 | Intracellular trafficking and secretion |
O | 193 | 2.98 | Posttranslational modification, protein turnover, chaperones |
C | 324 | 5.00 | Energy production conversion |
G | 714 | 11.02 | Carbohydrate transport and metabolism |
E | 659 | 10.17 | Amino acid transport metabolism |
F | 109 | 1.68 | Nucleotide transport and metabolism |
H | 192 | 2.96 | Coenzyme transport and metabolism |
I | 227 | 3.50 | Lipid transport and metabolism |
P | 333 | 5.14 | Inorganic ion transport and metabolism |
Q | 165 | 2.55 | Secondary metabolite biosynthesis, transport and catabolism |
R | 842 | 13.00 | General function prediction only |
S | 627 | 9.68 | Function unknown |
- | 1,636 | 22.09 | Not in COGS |