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Table 5. Number of genes associated with the general COG functional categories

From: Complete genome sequence of Rhizobium leguminosarum bv trifolii strain WSM2304, an effective microsymbiont of the South American clover Trifolium polymorphum

Code

value

%age

Description

J

194

2.95

Translation, ribosomal structure and biogenesis

A

0

0.00

RNA processing and modification

K

558

8.48

Transcription

L

164

2.49

Replication, recombination and repair

B

2

0.03

Chromatin structure and dynamics

D

38

0.58

Cell cycle control, mitosis and meiosis

Y

0

0.00

Nuclear structure

V

66

1.00

Defense mechanisms

T

317

4.82

Signal transduction mechanisms

M

309

4.70

Cell wall/membrane biogenesis

N

91

1.38

Cell motility

Z

0

0.00

Cytoskeleton

W

0

0.00

Extracellular structures

U

88

1.34

Intracellular trafficking and secretion

O

165

2.51

Posttranslational modification, protein turnover, chaperones

C

314

4.77

Energy production and conversion

G

599

9.10

Carbohydrate transport and metabolism

E

687

10.44

Amino acid transport and metabolism

F

109

1.66

Nucleotide transport and metabolism

H

180

2.74

Coenzyme transport and metabolism

I

238

3.62

Lipid transport and metabolism

P

278

4.22

Inorganic ion transport and metabolism

Q

156

2.37

Secondary metabolites biosynthesis, transport and catabolism

R

710

10.79

General function prediction only

S

532

8.08

Function unknown

-

1,476

22.43

Not in COGs