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Table 2. Genome sequencing project information for R. leguminosarum bv trifolii WSM2304.

From: Complete genome sequence of Rhizobium leguminosarum bv trifolii strain WSM2304, an effective microsymbiont of the South American clover Trifolium polymorphum

MIGS ID

Property

Term

MIGS-31

Finishing quality

Finished

MIGS-28

Libraries used

Four genomic libraries: three Sanger libraries; 1–2 kb pTH1522, 6–8 kb pMCL200, fosmid pcc1Fos and one 454 pyrosequencing standard library

MIGS-29

Sequencing platforms

ABI3730xl, 454 GS FLX

MIGS-31.2

Sequencing coverage

21.3× Sanger; 10.1× Pyrosequencing

MIGS-30

Assemblers

Newbler version 1.1.02.15, Phrap

MIGS-32

Gene calling method

Prodigal

 

Genbank ID

CP001191 (Chromosome)a

 

CP001192 (pRLG201)b

 

CP001193 (pRLG202)c

 

CP001194 (pRLG204)d

 

CP001195 (pRLG205)e

 

Genbank Date of Release

16-OCTOBER-2008

 

GOLD ID

Gc00870f

 

NCBI project ID

20179

 

Database: IMG

643348569 g

 

Project relevance

Symbiotic nitrogen fixation, agriculture

  1. a http://www.ncbi.nlm.nih.gov/nuccore/209533368
  2. b http://www.ncbi.nlm.nih.gov/nuccore/209537694
  3. c http://www.ncbi.nlm.nih.gov/nuccore/209538856
  4. d http://www.ncbi.nlm.nih.gov/nuccore/209539307
  5. e http://www.ncbi.nlm.nih.gov/nuccore/209539531
  6. f http://genomesonline.org/GOLD_CARDS/Gc00870.html
  7. g http://img.jgi.doe.gov/taxon_oid=64173348569