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Table 1. Classification and general features of Phocaeicola abscessus strain 7401987T

From: Non-contiguous finished genome sequence of Phocaeicola abscessus type strain 7401987T

MIGS ID Property Term Evidence codea
  Current classification Domain Bacteria TAS [4]
  Phylum Bacteroidetes TAS [5,6]
  Class Bacteroidia TAS [5,7]
  Order Bacteroidales TAS [5,8]
  Genus Phocaeicola TAS [1]
  Species Phocaeicola abscessus TAS [1]
  Strain 7401987T TAS [1]
  Gram stain Negative TAS [1]
  Cell shape Pleomorphic forms TAS [1]
  Motility Motile TAS [1]
  Sporulation Non-sporulating TAS [1]
  Temperature range Mesophile TAS [1]
  Optimum temperature 37°C TAS [1]
MIGS-6.3 Salinity Not reported IDA
MIGS-22 Oxygen requirement Strictly anaerobic TAS [1]
  Carbon source Asaccharolytic TAS [1]
  Energy source Heterotrophic NAS
MIGS-6 Habitat Host IDA
MIGS-15 Biotic relationship Free living IDA
  Pathogenicity Unknown  
  Biosafety level 2 NAS
MIGS-14 Isolation Human brain abscess NAS
MIGS-4 Geographic location Marseille, France IDA
MIGS-5 Sample collection time 2007 IDA
MIGS-4.1 Latitude 43°18 N IDA
MIGS-4.1 Longitude 5°23 E IDA
MIGS-4.3 Depth Surface IDA
MIGS-4.4 Altitude 21 m above sea level IDA
  1. Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [9]. If the evidence is IDA, then the property was directly observed for a live isolate by one of the authors or an expert mentioned in the acknowledgements.