Table 4. Number of genes associated with the general COG functional categories
Code | value | %age | Description |
|---|---|---|---|
J | 149 | 5.2 | Translation, ribosomal structure and biogenesis |
A | 3 | 0.1 | RNA processing and modification |
K | 162 | 5.7 | Transcription |
L | 117 | 4.1 | Replication, recombination and repair |
B | 3 | 0.1 | Chromatin structure and dynamics |
D | 25 | 0.9 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 30 | 1.1 | Defense mechanisms |
T | 86 | 3.0 | Signal transduction mechanisms |
M | 165 | 5.8 | Cell wall/membrane/envelope biogenesis |
N | 32 | 1.1 | Cell motility |
Z | 1 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 51 | 1.8 | Intracellular trafficking and secretion, and vesicular transport |
O | 118 | 4.1 | Posttranslational modification, protein turnover, chaperones |
C | 170 | 5.9 | Energy production and conversion |
G | 306 | 10.7 | Carbohydrate transport and metabolism |
E | 334 | 11.7 | Amino acid transport and metabolism |
F | 74 | 2.6 | Nucleotide transport and metabolism |
H | 128 | 4.5 | Coenzyme transport and metabolism |
I | 99 | 3.5 | Lipid transport and metabolism |
P | 145 | 5.1 | Inorganic ion transport and metabolism |
Q | 85 | 3.0 | Secondary metabolites biosynthesis, transport and catabolism |
R | 331 | 11.5 | General function prediction only |
S | 254 | 8.9 | Function unknown |
- | 689 | 21.0 | Not in COGs |