Table 3. Genome Statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 3,161,245 | 100.00 |
DNA coding region (bp) | 2,813,333 | 88.99 |
DNA G+C content (bp) | 2,185,501 | 69.13 |
Number of scaffolds | 10 | |
Total genes | 3,288 | 100.00 |
RNA genes | 45 | 1.37 |
rRNA operons | 1 | |
tRNA genes | 37 | 1.13 |
Protein-coding genes | 3,243 | 98.63 |
Genes with function prediction (proteins) | 2,645 | 80.44 |
Genes in paralog clusters | 2,688 | 81.75 |
Genes assigned to COGs | 2,599 | 79.05 |
Genes assigned Pfam domains | 2,689 | 81.78 |
Genes with signal peptides | 235 | 7.15 |
Genes with transmembrane helices | 664 | 20.19 |
CRISPR repeats | 1 |