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Table 6. Percentage of genes associated with the 25 general COG functional categories for Anaerococcus pacaensis and Anaerococcus prevotii DSM 20548.

From: Non-contiguous finished genome sequence and description of Anaerococcus pacaensis sp. nov., a new species of anaerobic bacterium

Code COG description A. pacaensis%age A. prevotii % age Difference (in %)
J Translation 6.91 7.53 −0.62
A RNA processing and modification 0.17 0.10 0.07
K Transcription 6.99 6.91 0.08
L Replication, recombination and repair 7.30 6.13 1.17
B Chromatin structure and dynamics 0.17 0.16 0.01
D Cell cycle control, mitosis and meiosis 2.01 1.56 0.45
Y Nuclear structure 0.00 0.05 −0.05
V Defense mechanisms 4.24 3.43 0.81
T Signal transduction mechanisms 3.15 3.17 −0.02
M Cell wall/membrane biogenesis 4.06 5.24 −1.18
N Cell motility 0.70 0.36 0.34
Z Cytoskeleton 0.13 0.16 −0.03
W Extracellular structures 0.00 0.00 0.00
U Intracellular trafficking and secretion 2.10 1.92 0.18
O Posttranslational modification, protein turnover, chaperones 4.06 3.63 0.43
C Energy production and conversion 5.64 6.59 −0.95
G Carbohydrate transport and metabolism 6.47 8.41 −1.94
E Amino acid transport and metabolism 6.34 6.65 −0.31
F Nucleotide transport and metabolism 3.06 3.69 −0.63
H Coenzyme transport and metabolism 3.32 3.58 −0.26
I Lipid transport and metabolism 2.36 2.34 0.02
P Inorganic ion transport and metabolism 6.86 6.80 0.06
Q Secondary metabolites biosynthesis, transport and catabolism 1.01 0.78 0.23
R General function prediction only 11.89 11.21 0.68
S Function unknown 11.06 9.61 1.45
Not in COGs 1.40 0.99 0.41