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Table 1. Classification and general features of J. denitrificans Prevot 55134T in accordance with the MIGS recommendations [12]

From: Complete genome sequence of Jonesia denitrificans type strain (Prevot 55134T)

MIGS ID

Property

Term

Evidence code

  

Domain Bacteria

TAS [13]

  

Phylum Firmicutes

TAS [14]

  

Class Actinobacteria

TAS [15]

  

Subclass Actinobacteridae

TAS [15]

  

Order Actinomycetales

TAS [15]

  

Suborder Micrococcineae

TAS [15]

  

Family Jonesiaceae

TAS [15]

  

Genus Jonesia

TAS [1]

  

Species Jonesia denitrificans

TAS [1]

  

Type strain Prevot 55134

TAS [16]

 

Gram stain

positive

TAS [16]

 

Cell shape

irregular rods, coccoid

TAS [16]

 

Motility

motile

TAS [16]

 

Sporulation

nonsporulating

TAS [16]

 

Temperature range

mesophile

TAS [16]

 

Optimum temperature

30–37°C

TAS [16]

 

Salinity

5% NaCl

TAS [16]

MIGS-22

Oxygen requirement

facultatively anaerobic

TAS [16]

 

Carbon source

unknown

 
 

Energy source

unknown

 

MIGS-6

Habitat

natural habitat not known

TAS [16]

MIGS-15

Biotic relationship

free living

NAS

MIGS-14

Pathogenicity

pathogenic for animals

TAS [16]

 

Biosafety level

2

TAS [17]

 

Isolation

cooked ox blood

TAS [2]

MIGS-4

Geographic location

France

NAS

MIGS-5

Sample collection time

not reported

 

MIGS-4.1

Latitude - Longitude

not reported

 

MIGS-4.2

 

MIGS-4.3

Depth

not reported

 

MIGS-4.4

Altitude

not reported

 
  1. Evidence codes - IDA: Inferred from Direct Assay (first time in publication); TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [18]. If the evidence code is IDA, then the property should have been directly observed for a living isolate by one of the authors, or an expert mentioned in the acknowledgements.