Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Thermanaerovibrio acidaminovorans type strain (Su883T)
Code | Value | %age | Description |
|---|---|---|---|
J | 150 | 8.5 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 84 | 4.8 | Transcription |
L | 71 | 4.0 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 26 | 1.5 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.0 | Nuclear structure |
V | 11 | 0.6 | Defense mechanisms |
T | 101 | 5.7 | Signal transduction mechanisms |
M | 97 | 5.5 | Cell wall/membrane biogenesis |
N | 71 | 4.0 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 38 | 2.2 | Intracellular trafficking and secretion |
O | 53 | 3.0 | Posttranslational modification, protein turnover, chaperones |
C | 126 | 7.1 | Energy production and conversion |
G | 86 | 4.9 | Carbohydrate transport and metabolism |
E | 185 | 10.5 | Amino acid transport and metabolism |
F | 66 | 3.7 | Nucleotide transport and metabolism |
H | 97 | 5.5 | Coenzyme transport and metabolism |
I | 32 | 1.8 | Lipid transport and metabolism |
P | 63 | 3.6 | Inorganic ion transport and metabolism |
Q | 18 | 1.0 | Secondary metabolites biosynthesis, transport and catabolism |
R | 152 | 8.6 | General function prediction only |
S | 104 | 5.9 | Function unknown |
- | 282 | 16.0 | Not in COGs |