Skip to main content

Table 5. Number of genes associated with the 25 general COG functional categories

From: Non-contiguous finished genome sequence and description of Kallipyga massiliensis gen. nov., sp. nov., a new member of the family Clostridiales Incertae Sedis XI

Code

Value

% agea

Description

J

131

4.86

Translation

A

0

0.032

RNA processing and modification

K

75

5.31

Transcription

L

107

5.74

Replication, recombination and repair

B

0

0

Chromatin structure and dynamics

D

15

0.78

Cell cycle control, mitosis and meiosis

Y

0

0

Nuclear structure

V

51

1.53

Defense mechanisms

T

22

1.69

Signal transduction mechanisms

M

72

3.42

Cell wall/membrane biogenesis

N

1

0

Cell motility

Z

0

0

Cytoskeleton

W

0

0

Extracellular structures

U

13

0.84

Intracellular trafficking and secretion

O

45

2.47

Posttranslational modification, protein turnover, chaperones

C

66

4.53

Energy production and conversion

G

88

2.87

Carbohydrate transport and metabolism

E

67

6.16

Amino acid transport and metabolism

F

47

2.05

Nucleotide transport and metabolism

H

34

2.34

Coenzyme transport and metabolism

I

28

4.01

Lipid transport and metabolism

P

59

4.14

Inorganic ion transport and metabolism

Q

4

0.81

Secondary metabolites biosynthesis, transport and catabolism

R

127

8.15

General function prediction only

S

113

5.93

Function unknown

−

410

26.03

Not in COGs

  1. aThe total is based on the total number of protein-coding genes in the annotated genome